Borja made his tenth start of the season for Malaga, who remain bottom of La Liga following a 0-0 draw with Girona.
The 25-year-old was replaced on the hour as Malaga, who were later reduced to ten men, as the hosts were held by a Girona now sitting in the top half of the table.
The stalemate means Malaga remain six points from safety in Spain's top flight.
In League One, Matt Grimes played the full 90 minutes in Northampton's 1-1 draw at promotion-chasing Blackburn Rovers.
The midfielder helped the Cobblers move three points clear of the dropzone, though former Swan Danny Graham denied the visitors victory as he headed home his tenth of the season with 15 minutes left.
Jay Fulton and Tyler Reid were unused substitutes in the FA Cup.
Fulton watched on from the bench as Wigan dumped West Ham out of the tournament while Reid saw Newport hold Tottenham Hotspur at Rodney Parade.
Jefferson Montero wasn't part of Getafe's matchday squad as they picked up a point at Sevilla, while Jordi Amat's Real Betis visit Celta Vigo tonight.